Cheap flights from New York John F Kennedy Intl Airport to San Juan from C$ 121

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from New York John F Kennedy Intl Airport to San Juan departing on 17/2. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
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Find the cheapest flights from New York John F Kennedy Intl Airport to San Juan

Cheap round-trip flights

Enter your travel dates to find the best prices.
JetBlue Logo
9:29 p.m. - 2:25 a.m.
JFK
-
SJU
3h 56mdirect
JetBlue Logo
6:05 a.m. - 9:11 a.m.
SJU
-
JFK
4h 06mdirect
C$ 242JetBlue
Sun, 25 Jan - Thu, 29 Jan
Delta Logo
6:54 p.m. - 11:59 p.m.
JFK
-
SJU
4h 05mdirect
Delta Logo
6:05 p.m. - 9:29 p.m.
SJU
-
JFK
4h 24mdirect
C$ 249Delta
Wed, 31 Dec - Tue, 13 Jan
JetBlue Logo
6:00 a.m. - 10:53 a.m.
JFK
-
SJU
3h 53mdirect
JetBlue Logo
6:05 a.m. - 9:11 a.m.
SJU
-
JFK
4h 06mdirect
C$ 256JetBlue
Sat, 3 Jan - Wed, 14 Jan
JetBlue Logo
9:55 p.m. - 2:59 a.m.
JFK
-
SJU
4h 04mdirect
JetBlue Logo
7:15 p.m. - 10:20 p.m.
SJU
-
JFK
4h 05mdirect
C$ 264JetBlue
Wed, 31 Dec - Tue, 3 Feb
Frontier Logo
10:00 a.m. - 12:25 a.m.
JFK
-
SJU
13h 25m1 stop
Frontier Logo
7:15 a.m. - 10:29 a.m.
SJU
-
JFK
4h 14mdirect
C$ 267Frontier
Mon, 12 Jan - Fri, 16 Jan
JetBlue Logo
8:00 p.m. - 12:07 a.m.
JFK
-
SJU
4h 07mdirect
JetBlue Logo
5:40 a.m. - 9:50 a.m.
SJU
-
JFK
4h 10mdirect
C$ 270JetBlue
Fri, 10 Apr - Sat, 18 Apr
Frontier Logo
10:02 a.m. - 7:43 p.m.
JFK
-
SJU
8h 41m1 stop
Frontier Logo
6:39 p.m. - 10:07 a.m.
SJU
-
JFK
15h 28m1 stop
C$ 282Frontier
Sat, 28 Feb - Sun, 8 Mar
JetBlue Logo
8:59 p.m. - 1:59 a.m.
JFK
-
SJU
4h 00mdirect
JetBlue Logo
2:21 p.m. - 5:27 p.m.
SJU
-
JFK
4h 06mdirect
C$ 284JetBlue
Fri, 26 Dec - Fri, 2 Jan
Frontier Logo
4:00 p.m. - 8:54 p.m.
JFK
-
SJU
3h 54mdirect
Frontier Logo
7:15 a.m. - 10:29 a.m.
SJU
-
JFK
4h 14mdirect
C$ 285Frontier
Mon, 12 Jan - Fri, 16 Jan
JetBlue Logo
8:45 p.m. - 12:59 a.m.
JFK
-
SJU
4h 14mdirect
JetBlue Logo
3:30 a.m. - 7:29 a.m.
SJU
-
JFK
3h 59mdirect
C$ 297JetBlue
Fri, 8 May - Mon, 18 May

JetBlue flights from New York John F Kennedy Intl Airport to San Juan

Our best JetBlue deals on New York John F Kennedy Intl Airport to San Juan flight tickets
JetBlue
25 Jan
JFK6:50 p.m.New York John F Kennedy Intl
4h 00m
SJU11:50 p.m.San Juan Luis Munoz Marin Intl
1 Feb
SJU7:15 p.m.San Juan Luis Munoz Marin Intl
4h 05m
JFK10:20 p.m.New York John F Kennedy Intl
JetBlue
3 Jan
JFK6:00 a.m.New York John F Kennedy Intl
3h 53m
SJU10:53 a.m.San Juan Luis Munoz Marin Intl
14 Jan
SJU6:05 a.m.San Juan Luis Munoz Marin Intl
4h 06m
JFK9:11 a.m.New York John F Kennedy Intl
JetBlue
31 Dec
JFK9:55 p.m.New York John F Kennedy Intl
4h 04m
SJU2:59 a.m.San Juan Luis Munoz Marin Intl
3 Feb
SJU7:15 p.m.San Juan Luis Munoz Marin Intl
4h 05m
JFK10:20 p.m.New York John F Kennedy Intl

Delta flights from New York John F Kennedy Intl Airport to San Juan

Our best Delta deals on New York John F Kennedy Intl Airport to San Juan flight tickets
Delta
31 Dec
JFK6:54 p.m.New York John F Kennedy Intl
4h 05m
SJU11:59 p.m.San Juan Luis Munoz Marin Intl
13 Jan
SJU6:05 p.m.San Juan Luis Munoz Marin Intl
4h 24m
JFK9:29 p.m.New York John F Kennedy Intl
Delta
24 Feb
JFK6:55 p.m.New York John F Kennedy Intl
4h 01m
SJU11:56 p.m.San Juan Luis Munoz Marin Intl
3 Mar
SJU7:00 a.m.San Juan Luis Munoz Marin Intl
4h 05m
JFK10:05 a.m.New York John F Kennedy Intl
Delta
3 Mar
JFK6:55 p.m.New York John F Kennedy Intl
4h 01m
SJU11:56 p.m.San Juan Luis Munoz Marin Intl
24 Mar
SJU7:00 a.m.San Juan Luis Munoz Marin Intl
4h 14m
JFK11:14 a.m.New York John F Kennedy Intl

momondo Fare Finder

 
Customize your flight search to find flights from New York John F Kennedy Intl Airport to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 96,600 searches. Data last updated 16 December 2025.
Use the filters below to find and compare flights from New York John F Kennedy Intl Airport to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Sun 25/1

9:29 p.m.-2:25 a.m.

Nonstop3h 56m

San Juan Luis Munoz Marin Intl

Thu 29/1

6:05 a.m.-9:11 a.m.

Nonstop4h 06m

C$ 242

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Wed 31/12

6:54 p.m.-11:59 p.m.

Nonstop4h 05m

San Juan Luis Munoz Marin Intl

Tue 13/1

6:05 p.m.-9:29 p.m.

Nonstop4h 24m

C$ 249

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Sat 3/1

6:00 a.m.-10:53 a.m.

Nonstop3h 53m

San Juan Luis Munoz Marin Intl

Wed 14/1

6:05 a.m.-9:11 a.m.

Nonstop4h 06m

C$ 256

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Wed 31/12

9:55 p.m.-2:59 a.m.

Nonstop4h 04m

San Juan Luis Munoz Marin Intl

Tue 3/2

7:15 p.m.-10:20 p.m.

Nonstop4h 05m

C$ 264

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Mon 12/1

10:00 a.m.-12:25 a.m.

1 stop13h 25m

San Juan Luis Munoz Marin Intl

Fri 16/1

7:15 a.m.-10:29 a.m.

Nonstop4h 14m

C$ 267

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Fri 10/4

8:00 p.m.-12:07 a.m.

Nonstop4h 07m

San Juan Luis Munoz Marin Intl

Sat 18/4

5:40 a.m.-9:50 a.m.

Nonstop4h 10m

C$ 270

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Sat 28/2

10:02 a.m.-7:43 p.m.

1 stop8h 41m

San Juan Luis Munoz Marin Intl

Sun 8/3

6:39 p.m.-10:07 a.m.

1 stop15h 28m

C$ 282

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Fri 26/12

8:59 p.m.-1:59 a.m.

Nonstop4h 00m

San Juan Luis Munoz Marin Intl

Fri 2/1

2:21 p.m.-5:27 p.m.

Nonstop4h 06m

C$ 284

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Mon 12/1

4:00 p.m.-8:54 p.m.

Nonstop3h 54m

San Juan Luis Munoz Marin Intl

Fri 16/1

7:15 a.m.-10:29 a.m.

Nonstop4h 14m

C$ 285

New YorkSan Juan

JFK - SJU

JFKSJU

New York John F Kennedy Intl

Fri 8/5

8:45 p.m.-12:59 a.m.

Nonstop4h 14m

San Juan Luis Munoz Marin Intl

Mon 18/5

3:30 a.m.-7:29 a.m.

Nonstop3h 59m

C$ 297

Flights are sorted by cheapest round-trip flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to San Juan from

How to get the cheapest flight ticket from New York John F Kennedy Intl Airport to San Juan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the cheapest month to fly to San Juan?

The month of March is, on average, the cheapest month to fly to San Juan from New York John F Kennedy Intl Airport, with most prices found around C$ 275. If you aren’t able to travel to San Juan during the month of March, then flying in October is also cheap. Prices for this month can be found on momondo for an average of C$ 300.

What is the cheapest day to depart on your flight to San Juan?

According to our data, Wednesday is the cheapest day to fly to San Juan from New York John F Kennedy Intl Airport. The lowest ticket price found for a Wednesday departure recently was C$ 269. Keep in mind that prices can always vary depending on your route and whether or not you are flying domestic or international. On the other hand, Saturday is the most expensive day to depart from New York John F Kennedy Intl Airport because it is more convenient for both business and leisure travellers. As a result, prices tend to be around C$ 410.

What is the cheapest time of day to depart on your flight to San Juan?

Our most recent data shows that the best time of day to fly to San Juan is in the afternoon. Flights from New York John F Kennedy Intl Airport to San Juan during this time can be as low as C$ 263. In the evening is when there is more demand to fly to San Juan, so prices are often more expensive at around C$ 411 per ticket.

What is the cheapest New York John F Kennedy Intl to San Juan flight route?

Fly from New York John F Kennedy Intl to San Juan Luis Munoz Marin Intl for the best New York John F Kennedy Intl - San Juan flight prices

How far in advance should I book a flight to San Juan?

You are more likely to see cheaper flights to San Juan from New York John F Kennedy Intl Airport when booking weeks ahead of your departure date. In general, you can expect to find flights to San Juan for around C$ 361 when searching weeks out. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to San Juan from New York John F Kennedy Intl Airport for as low as C$ 332 on momondo.

What cabin class options are available on New York John F Kennedy Intl to San Juan flights?

There are 2 cabin classes available to choose from on New York John F Kennedy Intl to San Juan flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

Cheap New York John F Kennedy Intl Airport to San Juan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from New York John F Kennedy Intl Airport to San Juan

Fastest flight time

3h 54m

Direct flights

Every day

Airports in San Juan

2 airports
The fastest flight from New York John F Kennedy Intl Airport to San Juan takes 3h 54m
Direct flights go from New York John F Kennedy Intl Airport to San Juan every day.
There are 2 airports in San Juan. From New York John F Kennedy Intl Airport there are direct flights to San Juan Luis Munoz Marin Intl (SJU).
  • How far is New York John F Kennedy Intl to San Juan by plane?

    A flight from New York John F Kennedy Intl to San Juan will travel around 2570.4 km. Flights usually cover this in 3h 54m, depending on flying conditions and air traffic around both airports.

  • When did momondo last update prices for flights from New York John F Kennedy Intl Airport to San Juan?

    Prices for flights from New York John F Kennedy Intl Airport to San Juan were last updated today.

  • How many operators does momondo search for flights from New York John F Kennedy Intl Airport to San Juan?

  • How old do you have to be to fly from New York John F Kennedy Intl Airport to San Juan?

    The minimum age a child must be to fly alone is five but airlines that offer an unaccompanied minor (UNMR) service will have their own age restrictions, including rules around flight length, timings, and stopovers. We always recommend checking with the individual airline you are booking with to travel from New York John F Kennedy Intl Airport to San Juan.

  • What documentation or ID do you need to fly to San Juan?

    The travel and health documents you'll need for your trip to San Juan may differ based on your itinerary and personal situation. Typically, you should have several documents on hand, such as a national ID card or driver's license and a passport that is valid for six months after your intended arrival at San Juan. It is always advisable to seek advice from your airline or a trusted third party, such as IATA.

Best airlines flying from New York John F Kennedy Intl Airport to San Juan

Compare and see reviews for airlines that fly from New York John F Kennedy Intl Airport to San Juan with momondo
Airline
Rating
Free Cancellation
Price
FrontierPriceFrom C$ 118Free CancellationRating
5.8
3,082 reviews
Search Frontier flights
JetBluePriceFrom C$ 241Free CancellationRating
7.2
2,894 reviews
Search JetBlue flights

Why use momondo?

Why should I use momondo to find a flight deal from New York to San Juan?

We help find the flight that best suits your needs, momondo compares prices from hundreds of airlines and travel agents and helps you filter them to find the best flight from New York to San Juan for you.

Can I find flights from New York to San Juan with flexible booking policies on momondo?

Yes. All flights to San Juan from New York on momondo can be compared and filtered by various policies on offer, including flexible booking.

How can momondo help me find flights from New York to San Juan?

momondo offers useful filters to help you find the right flight. Choose specific flight times, airports or even what payment method you prefer. We have numerous options to help you book your ideal flight from New York to San Juan.

I’m not ready to book a flight from New York to San Juan right now. Can momondo alert me if prices change?

If you are simply researching potential flights to San Juan, momondo offers a useful price alert feature which will track prices for flights to San Juan from New York and alert you when they change.

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1 adult
Thu 15/1
Thu 22/1

Find better results for your trip to Puerto Rico

Fly into one of these airports located in San Juan

Airports listed have a maximum distance of 11.5 km from San Juan